So, let\u2019s learn how to file the GSTR-9C return online with ClearTax. While at it, let\u2019s also get a detailed walkthrough of GSTR-9C return steps on ClearTax and the top benefits of filing GSTR-9C via ClearTax.<\/p>\n\n\n\n
<\/span>What is GSTR-9C?<\/span><\/h2>\n\n\n\nGSTR-9C is an annual return reconciliation form required under the GST Act. It matches the figures in your filed GST returns (like GSTR-9) with your audited financial statements.<\/p>\n\n\n\n
If your turnover exceeds INR 5 crore in a financial year, filing GSTR-9C is mandatory. It confirms\u2026<\/p>\n\n\n\n
\n- The accuracy of your tax declaration<\/li>\n\n\n\n
- That your tax paid, ITC claimed, and turnover match across records<\/li>\n\n\n\n
- Any discrepancies are explained in detail<\/li>\n<\/ul>\n\n\n\n
Earlier, this form had to be certified by a Chartered Accountant. Since FY 2020-21, it only requires self-certification, but it still needs to be accurate.<\/p>\n\n\n\n
To help with this, most companies now prefer using tools like ClearTax. The platform makes the entire process, from reconciliation to filing, easy. The built-in ClearTax GST reconciliation tool makes sure that the numbers match, and issues get flagged clearly.<\/p>\n\n\n\n
Suggested Read: What is GSTR-9C? A Complete Guide<\/a><\/strong><\/p>\n\n\n\n<\/span>Step-by-Step GSTR-9C Filing Process on ClearTax<\/span><\/h2>\n\n\n\nNow let\u2019s walk through the GSTR-9C filing process on ClearTax. This is the smart way to handle your filing in less time with fewer errors.<\/p>\n\n\n\n
The GSTR-9C return steps on ClearTax include the following\u2026<\/p>\n\n\n\n
Step 1: <\/strong>Go to www.cleartax.in and sign in to your account.<\/p>\n\n\n\nStep 2: <\/strong>Choose the relevant GSTIN from your business dashboard. Ensure that you\u2019ve already filed your GSTR-9, because you can only begin GSTR-9C filing after that is complete.<\/p>\n\n\n\n![\"\"](\"https:\/\/cdn.techjockey.com\/blog\/wp-content\/uploads\/2025\/07\/31191857\/GSTRC-9c-3.png\")
<\/figure>\n\n\n\nStep 3:<\/strong> Using the ClearTax GST reconciliation tool, import GSTR-1<\/a>, GSTR-3B<\/a>, and GSTR-9<\/a> data directly from the GST portal<\/p>\n\n\n\nStep 4: <\/strong>Once data is uploaded, the system will automatically match turnover, tax paid, and input tax credit (ITC), showing mismatches side-by-side for review. All calculations follow the official GSTR-9C format in ClearTax.<\/p>\n\n\n\nStep 5:<\/strong> You\u2019ll see the GSTR-9C format in ClearTax pre-filled using your imported data. Review each section, including:<\/p>\n\n\n\n\n- Part A:<\/strong> Reconciliation statement<\/li>\n\n\n\n
- Part B<\/strong>: Self-certification<\/li>\n<\/ul>\n\n\n\n
If there are differences between books and GSTR returns, you are required to explain them. You can enter clarifications, remarks, or supporting documents, all inside the platform.<\/p>\n\n\n\n
<\/span>ClearTax GST <\/span><\/h3><\/div>\n\n\n\nStep 6:<\/strong> Upload supporting documents, including\u2026<\/p>\n\n\n\n\n- P&L Statement<\/li>\n\n\n\n
- Balance Sheet<\/li>\n\n\n\n
- Notes to accounts<\/li>\n<\/ul>\n\n\n\n
Step 7: <\/strong>Once verified, click Generate GSTR-9C JSON. This file format is required to upload your return to the official GST portal.<\/p>\n\n\n\nAdvanced users usually take this step further and upload GSTR-9C JSON on ClearTax once more for final verification. This lets them double-check before heading to the portal.<\/p>\n\n\n\n![\"\"](\"https:\/\/cdn.techjockey.com\/blog\/wp-content\/uploads\/2025\/07\/31192002\/GSTR-9c-2.png\")
<\/figure>\n\n\n\nStep 8: <\/strong>Now, upload the JSON to the GST portal and the file return. You can refer to our blog to know how to accomplish this in detail.<\/p>\n\n\n\nStep <\/strong>9: Submit and e-Sign (using DSC or Aadhaar OTP)<\/p>\n\n\n\n![\"\"](\"https:\/\/cdn.techjockey.com\/blog\/wp-content\/uploads\/2025\/07\/31192012\/GSTR-9c-1-1024x387.png\")
<\/figure>\n\n\n\nOnce filed, you can download the filing acknowledgment for your records. That\u2019s how easy it is to complete the GSTR-9C return steps on ClearTax!<\/p>\n\n\n\n
<\/span>Benefits of Filing GSTR-9C via ClearTax<\/span><\/h2>\n\n\n\nThere are major advantages to managing your filing through ClearTax. Here are the top benefits of filing GSTR-9C via ClearTax\u2026<\/p>\n\n\n\n
\n- Trusted GST Software Across India: <\/strong>Thousands of businesses rely on ClearTax for monthly and annual GST returns. The platform is government-approved and compliant with all GST filing rules, including updates to the GSTR-9C format in ClearTax.<\/li>\n\n\n\n
- Auto-Reconciliation:<\/strong> With the ClearTax GST reconciliation tool, you never have to manually compare entries across returns and books. In fact, 95% of reconciliation work is done automatically.<\/li>\n\n\n\n
- No More Manual Errors: <\/strong>GSTR-9C is a sensitive form. Small mistakes can cause investigations or notices. ClearTax Auto-checks help you eliminate errors, which makes ClearTax GSTR 9C filing secure and risk-free.<\/li>\n\n\n\n
- Guided Interface & Tutorials: <\/strong>The design is user-friendly and built for both tax experts and new users. You get a full ClearTax GSTR-9C filing tutorial, demo videos, and step-by-step instructions.<\/li>\n\n\n\n
- Built for CAs & Finance Teams:<\/strong> If you are a CA handling multiple clients, you\u2019ll love bulk upload features and dashboard filing for different GSTINs. One could never find an easier answer to how to file the GSTR-9C return online than this!<\/li>\n\n\n\n
- Correct Format & JSON Generator:<\/strong> You never need to worry about the format. The software builds your GSTR-9C using the latest templates and automatically creates the correct JSON. Simply click to download and upload to GSTN. You can also upload GSTR-9C JSON on ClearTax to see a live preview, a rare feature in most GST tools<\/li>\n<\/ul>\n\n\n\n
<\/span>ClearTax GST <\/span><\/h3><\/div>\n\n\n\nConclusion<\/strong><\/p>\n\n\n\nFiling GSTR-9C does not need to be a cause of stress. Whether you are a small business or a large company with multiple GSTINs, the GSTR-9C filing process on ClearTax will save you time and reduce compliance risk.<\/p>\n\n\n\n
From importing data, reconciling with your books, reviewing your return, and uploading to the GST portal, every step is built right into the software. What else does a taxpaying business in India need?<\/p>\n\n\n\n
So, get in touch with the Techjockey team and get your hands on the ClearTax GST software today itself!<\/p>\n","protected":false},"excerpt":{"rendered":"
Filing GST returns each year is a must for registered taxpayers in India. But if your company earns more than INR 5 crore annually, then filing GSTR-9C becomes mandatory. GSTR-9C is a reconciliation statement, and it ensures that the data you submit to the GST portal aligns with your audited books of accounts. Owing to […]<\/p>\n","protected":false},"author":212,"featured_media":58384,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[7515],"tags":[],"acf":[],"yoast_head":"\n
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Earlier, this form had to be certified by a Chartered Accountant. Since FY 2020-21, it only requires self-certification, but it still needs to be accurate.<\/p>\n\n\n\n
To help with this, most companies now prefer using tools like ClearTax. The platform makes the entire process, from reconciliation to filing, easy. The built-in ClearTax GST reconciliation tool makes sure that the numbers match, and issues get flagged clearly.<\/p>\n\n\n\n
Suggested Read: What is GSTR-9C? A Complete Guide<\/a><\/strong><\/p>\n\n\n\n Now let\u2019s walk through the GSTR-9C filing process on ClearTax. This is the smart way to handle your filing in less time with fewer errors.<\/p>\n\n\n\n The GSTR-9C return steps on ClearTax include the following\u2026<\/p>\n\n\n\n Step 1: <\/strong>Go to www.cleartax.in and sign in to your account.<\/p>\n\n\n\n Step 2: <\/strong>Choose the relevant GSTIN from your business dashboard. Ensure that you\u2019ve already filed your GSTR-9, because you can only begin GSTR-9C filing after that is complete.<\/p>\n\n\n\n Step 3:<\/strong> Using the ClearTax GST reconciliation tool, import GSTR-1<\/a>, GSTR-3B<\/a>, and GSTR-9<\/a> data directly from the GST portal<\/p>\n\n\n\n Step 4: <\/strong>Once data is uploaded, the system will automatically match turnover, tax paid, and input tax credit (ITC), showing mismatches side-by-side for review. All calculations follow the official GSTR-9C format in ClearTax.<\/p>\n\n\n\n Step 5:<\/strong> You\u2019ll see the GSTR-9C format in ClearTax pre-filled using your imported data. Review each section, including:<\/p>\n\n\n\n If there are differences between books and GSTR returns, you are required to explain them. You can enter clarifications, remarks, or supporting documents, all inside the platform.<\/p>\n\n\n\n Step 6:<\/strong> Upload supporting documents, including\u2026<\/p>\n\n\n\n Step 7: <\/strong>Once verified, click Generate GSTR-9C JSON. This file format is required to upload your return to the official GST portal.<\/p>\n\n\n\n Advanced users usually take this step further and upload GSTR-9C JSON on ClearTax once more for final verification. This lets them double-check before heading to the portal.<\/p>\n\n\n\n Step 8: <\/strong>Now, upload the JSON to the GST portal and the file return. You can refer to our blog to know how to accomplish this in detail.<\/p>\n\n\n\n Step <\/strong>9: Submit and e-Sign (using DSC or Aadhaar OTP)<\/p>\n\n\n\n Once filed, you can download the filing acknowledgment for your records. That\u2019s how easy it is to complete the GSTR-9C return steps on ClearTax!<\/p>\n\n\n\n There are major advantages to managing your filing through ClearTax. Here are the top benefits of filing GSTR-9C via ClearTax\u2026<\/p>\n\n\n\n Conclusion<\/strong><\/p>\n\n\n\n Filing GSTR-9C does not need to be a cause of stress. Whether you are a small business or a large company with multiple GSTINs, the GSTR-9C filing process on ClearTax will save you time and reduce compliance risk.<\/p>\n\n\n\n From importing data, reconciling with your books, reviewing your return, and uploading to the GST portal, every step is built right into the software. What else does a taxpaying business in India need?<\/p>\n\n\n\n So, get in touch with the Techjockey team and get your hands on the ClearTax GST software today itself!<\/p>\n","protected":false},"excerpt":{"rendered":" Filing GST returns each year is a must for registered taxpayers in India. But if your company earns more than INR 5 crore annually, then filing GSTR-9C becomes mandatory. GSTR-9C is a reconciliation statement, and it ensures that the data you submit to the GST portal aligns with your audited books of accounts. Owing to […]<\/p>\n","protected":false},"author":212,"featured_media":58384,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[7515],"tags":[],"acf":[],"yoast_head":"\n<\/span>Step-by-Step GSTR-9C Filing Process on ClearTax<\/span><\/h2>\n\n\n\n
<\/figure>\n\n\n\n\n
<\/span>ClearTax GST <\/span><\/h3><\/div>\n\n\n\n
\n
<\/figure>\n\n\n\n<\/figure>\n\n\n\n<\/span>Benefits of Filing GSTR-9C via ClearTax<\/span><\/h2>\n\n\n\n
\n
<\/span>ClearTax GST <\/span><\/h3><\/div>\n\n\n\n